BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012B02SP1|AL426315
(778 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1734 1542 0.0
>3x_Contig1734
Length = 17938
Score = 1542 bits (778), Expect = 0.0
Identities = 778/778 (100%)
Strand = Plus / Minus
Query: 1 gatcttattagtggggaattcgtattcgttcaatgggaccttagcagccttcaaatacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13348 gatcttattagtggggaattcgtattcgttcaatgggaccttagcagccttcaaatacct 13289
Query: 61 taggaatcctaattcggttggggtcaagaacatcaaagatttacctttacccttggtacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13288 taggaatcctaattcggttggggtcaagaacatcaaagatttacctttacccttggtacc 13229
Query: 121 tcttgcagttcttcctactctatgaatatagtctcttggatcatctggaggatcaaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13228 tcttgcagttcttcctactctatgaatatagtctcttggatcatctggaggatcaaattg 13169
Query: 181 gatgatccaatctaccgctgggatatccaaacctcttgctgccacatcggtacacactag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13168 gatgatccaatctaccgctgggatatccaaacctcttgctgccacatcggtacacactag 13109
Query: 241 aataccacgttcagcgttacagaattcgaagaaagtgtttgttctcttctgttgcttttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13108 aataccacgttcagcgttacagaattcgaagaaagtgtttgttctcttctgttgcttttg 13049
Query: 301 cttaccgtgcaattccaacactggtaaatcgatatagttcaaaagttcggcgtagtactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13048 cttaccgtgcaattccaacactggtaaatcgatatagttcaaaagttcggcgtagtactt 12989
Query: 361 cacagaattacatgacgataagaaaacaatgactttcttcttttggtttctcttcaagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12988 cacagaattacatgacgataagaaaacaatgactttcttcttttggtttctcttcaagaa 12929
Query: 421 cgagaacaatagtaggaatctcttatcgctctcgcaaacaacgtaaccttgttctaaccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12928 cgagaacaatagtaggaatctcttatcgctctcgcaaacaacgtaaccttgttctaaccc 12869
Query: 481 atctgccgttgaagtatccttctcagaatccacgttaatgaacaagggacctggtctcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12868 atctgccgttgaagtatccttctcagaatccacgttaatgaacaagggacctggtctcaa 12809
Query: 541 agagatacgcgccaaatcctcaaccttagtggtctgtgtagcagagaaaagcatcgattg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12808 agagatacgcgccaaatcctcaaccttagtggtctgtgtagcagagaaaagcatcgattg 12749
Query: 601 tctatcctcgtttggtaagatcttgataatctgtctcatttcatcttcgaacccaatttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12748 tctatcctcgtttggtaagatcttgataatctgtctcatttcatcttcgaacccaatttc 12689
Query: 661 caagatacgatccgcttcatcgatgacaagagccttcaagttcttaaagatgaagccctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12688 caagatacgatccgcttcatcgatgacaagagccttcaagttcttaaagatgaagccctt 12629
Query: 721 agtgttttgtaaatgatccaacaaacgacctggagtagcaatcaagatgttaacacct 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12628 agtgttttgtaaatgatccaacaaacgacctggagtagcaatcaagatgttaacacct 12571
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6091
Number of Sequences: 1807
Number of extensions: 6091
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 778
length of database: 10,358,551
effective HSP length: 16
effective length of query: 762
effective length of database: 10,329,639
effective search space: 7871184918
effective search space used: 7871184918
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)